Platform agnostic

Patho-Seq can analyze NGS direct-from-specimen sequencing files from any major hardware manufacturer. Using our novel algorithms, the total time for one analysis is less than five minutes - no matter if the sample is a pure sample or a complex poly microbial one.

Curated databases

Our Patho-Seq DB databases has the most up to date references, but without the clutter. Databases are filtered and automatically curated to ensure an ID you can rely on.

Cloud SaaS solution

Patho-Seq is always online and always updated. All you need is an internet browser. We push our new algorithms as well as new database references up to the cloud every night for your benefit.

---

Patho-Seq NGS - It is FAST!

Using our novel algorithms Patho-Seq will process your targeted NGS sequence file locally, and reduce the information needed to upload by a factor of 1000:1, while still retaining resolution and specificity. This means no lengthy file upload, and no costly big data file storage.

After upload, the cloud based Patho-Seq will analyze the uploaded reads against any of our curated Patho-Seq DB databases - no matter the target.

All this in less than 5 minutes! Including reporting!

---

Patho-Seq DB - The best microbial database there is.

Pathogenomix's curated pathogen database Patho-Seq DB, extends and improves the effectiveness of the public DNA sequence databases such as GenBank and others. While GenBank contains large numbers of current references, it also has many uninformative or even erroneous references that hinder accurate identification.

To ensure the best reference quality and accuracy, Patho-Seq DB enables users to curate a more medically-relevant reference database. Users can annotate, reject and approve references using personalized methods. This on top of the solid foundation of advanced automatic filters and cross referencing makes Patho-Seq DB the database of choice.

Curated databases are a prerequisite for rapid, accurate analysis of Next Generation Sequencing (NGS) as well as Sanger data. This will ensure that the user can be confident that the analysis results are complete and accurate.

Rapid Direct Sequencing Analysis of Clinical Samples using NGS or Sanger. Less than 5 minutes analysis time. No bioinformatics resources needed. Schnelle direkte Sequenzierungsanalyse klinischer Proben mit NGS oder Sanger. Weniger als 5 Minuten Analysezeit. Keine bioinformatischen Ressourcen erforderlich. Analisi rapida di sequenziamento diretto di campioni clinici utilizzando NGS o Sanger. Tempo di analisi inferiore a 5 minuti. Non sono necessarie risorse bioinformatiche. Análisis rápido de secuenciación directa de muestras clínicas mediante NGS o Sanger. Tiempo de análisis de menos de 5 minutos. No se necesitan recursos bioinformáticos. Analyse rapide par séquençage direct d'échantillons cliniques à l'aide de NGS ou de Sanger. Temps d'analyse inférieur à 5 minutes. Aucune ressource bioinformatique nécessaire. Análise rápida de sequenciamento direto de amostras clínicas usando NGS ou Sanger. Tempo de análise inferior a 5 minutos. Não são necessários recursos de bioinformática. NGS 또는 Sanger를 사용한 임상 샘플의 신속한 직접 염기서열 분석. 분석 시간은 5분 미만입니다. 생물정보학 자원이 필요하지 않습니다. 使用 NGS 或 Sanger 对临床样本进行快速直接测序分析。分析时间不到 5 分钟。不需要生物信息学资源。 NGS または Sanger を使用した臨床サンプルの高速直接シーケンス分析。分析時間は 5 分未満です。バイオインフォマティクスのリソースは必要ありません。 Быстрое прямое секвенирование клинических образцов с использованием NGS или Sanger. Время анализа менее 5 минут. Никаких биоинформатических ресурсов не требуется. Hitra analiza neposrednega zaporedja kliničnih vzorcev z uporabo NGS ali Sangerja. Čas analize manj kot 5 minut. Bioinformatični viri niso potrebni. Long-read sequencing, long-read analysis, long-read preprocessor, nanopore, Direct Sequencing analysis, identification, mixed clinical samples, patient, dual loci, HLA, HIV, HPV, bacteria, bacterium, fungi, fungal, virus, Sanger, NGS, Ion, Torrent, Illumina, 16s gene, rpob gene, ITS, ITS2 gene, 16s metagenomics, metagenomic sequencing, amplicon, metagenomic sequencing, dna sequencing, fungal sequencing, isentio, bacterial, sequencing, metagenomic, metagenomics, nucleotide sequence, pathogenomix, pathoseq, pathongs, polymicrobial, sequencing, ripseq, rpob sequencing, second opinion, shotgun, metagenomics, targeted ngs, ngs sequencing, full metagenomic sequencing, amplicon, 16sgene.com, 16smetagenomics.com, 16smetagenomicsequencing.com, 16ssequencingtools.com, ampliconmetagenomicsequencing.com, bacterialsequencing.com, bacterialsequencingtools.com, clinicalmetagenomics.com, dnasequencetools.com, dnasequencingtools.com, fullmetagenomicsequencing.com, fungalsequencing.com, fungalsequencingtools.com, itssequencingtools.com, metagenomics.bio, metagenomics.co, metagenomics.io, metagenomics.us, metagenomicsequencing.com, metagenomix.bio, metagenomix.co, metagenomix.info, metagenomix.io, metagenomix.net, metagenomix.org, metagenomix.us, microbiomeid.com, ngsmetagenomics.com, nucleotidetools.com, optogenetix.com, optogenetix.us, patho-ngs.com, patho-seq.com, PATHOGENOMIX.BIZ, PATHOGENOMIX.CO, PATHOGENOMIX.COM, pathogenomix.info, pathogenomix.io, pathogenomix.net, pathogenomix.org, PATHOGENOMIX.US, pathogenomixnet.com, pathogenomixngs.com, pathoinformatics.com, pathoinformatics.info, pathoinformatics.net, pathoinformatics.org, pathoinformaticsnet.com, pathongs.com, polymicrobialsequencing.com, ripseq.com, ripseq.io, ripseqngs.com, ripsequs.com, rpobgene.com, rpobmetagenomics.com, rpobmetagenomicsequencing.com, rpobsequencingtools.com, secondopinion.io, sequencedecoder.com, shotgunmetagenomics.com, shotgunmetagenomicsequencing.com, targetedngs.com, targetedngssequencing.com